University of Cambridge Training

Bioinformatics: EMBL-EBI - An Introduction to Sequence Searching with EMBL-EBI new 

Provided by: GSLS

Tue 28 Jan 2014  –  Department of Genetics, Room G12


Bookings cannot be made on this event (Event is completed)
The following alternative date is available:
    Mon 10 Nov 2014
Register your interest - if you cannot make any of the currently scheduled dates and would be interested in additional dates being scheduled.

Description: An introduction on how to search EBI databases using sequence search tools. The workshop will introduce tools such as BLAST, FASTA and PSI-BLAST; explain how they function and the ways to make effective use of them to locate different types of biological data and information. Further information is available here.

This session is one of a series of short introductions to EBI Services, run together, but bookable separately (see Related Courses section below).

Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking here.

Target audience:

  • Our courses are open to all who might benefit
  • Booking priority is given to people from Cambridge University and Collaborating Institutes
  • Individual Course fees are required only from External participants not from Collaborating Institutes

The workshop is aimed at PhD, post-doctoral researchers and principle investigators working in wet-lab biology. Participants who are looking for a basic introduction to the searching the EBI for nucleotide or protein sequences and want to know more about accessing these biological data.

Duration: 0.5

Sessions:

Number of sessions: 1

Date Time Venue Trainer
Tue 28 Jan 13:30 - 17:00 Department of Genetics, Room G12 Andrew Cowley

Format: Presentations, demonstrations and practicals

Frequency: A number of times per year

Prerequisites:

  • Basic computing skills
  • Graduate level in Life Sciences

Aims:

  • To provide a practical introduction to the sequence searching at the EBI

Objectives: After this course you should be able to...

  • Understand the basics of sequence similarity searching and sequence homology
  • Be able to find biological sequences from across the whole of EMBL-EBI
  • Use different sequence similarity searching tools available at EMBL-EBI and understand which ones are appropriate for different applications

Related courses:

Theme: SBS Practical Bioinformatics Training: EBI Services