GSLS Bioinformatics Training 2011-12

This course provides a gentle and practical introduction to the writing of PERL programs for the complete novice. Participants are led through a series of example programs. Upon completion of the course, attentive participants will be able to write simple PERL programs from scratch and to customize more complex code to fit their needs. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This two day course provides an introduction to the investigation of annotated Genomes stored in Ensembl databases using the Ensembl Genome Browser. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This two day course provides an introduction to the investigation of annotated Genomes stored in Ensembl databases using the Ensembl Genome Browser. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

The aim of this course is to provide hands-on experience in analysing NGS data, including:

• Knowledge of the various sequencing technologies, data formats and analysis workflows commonly used in "'NGS'" analysis workflows
• Hands-on experience with common analytical workflows for ChIP-seq, RNASeq data and De Novo Genome Assemblies using computer exercises.
• An overview of available tools and discuss their limitations.

Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

The aim of this course is to provide hands-on experience in analysing NGS data, including:

• Knowledge of the various sequencing technologies, data formats and analysis workflows commonly used in "'NGS'" analysis workflows
• Hands-on experience with common analytical workflows for ChIP-seq, RNASeq data and De Novo Genome Assemblies using computer exercises.
• An overview of available tools and discuss their limitations.

Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course introduces researchers to a multidisciplinary approach to microarray data analysis. Attention is devoted to the design of microarray experiments, data normalization and quality control as well as to statistical analysis. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course introduces researchers to a multidisciplinary approach to microarray data analysis. Attention is devoted to the design of microarray experiments, data normalization and quality control as well as to statistical analysis. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course introduces researchers to a multidisciplinary approach to microarray data analysis. Attention is devoted to the design of microarray experiments, data normalization and quality control as well as to statistical analysis. Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

Annotators from the Pathogen Genomics Group at the Wellcome Trust Sanger Institute give a comprehensive introduction to the latest Genome Analysis software (Artemis and ACT). Further information is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email

This session provides an introduction to the European Nucleotide Archive (ENA) record of the world's nucleotide sequencing information, covering raw sequencing data, sequence assembly information and functional annotation available from the Europian Bioinformatics Institute (EBI). Further information for this session is available.

This session is one of a series of short introductions to EBI Services, run together, but bookable separately (see Related Courses section below).

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This session provides an introduction to the tools to access and analyze Transcriptomics data available from the Europian Bioinformatics Institute (EBI). Further information for this session is available.

This session is one of a series of short introductions to EBI Services, run together, but bookable separately (see Related Courses section below).

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

In this session we will introduce four protein databases from the EBI. The databases are: UniProtKB, InterPro, IntAct and Reactome. Further information for this session is available.

This session is one of a series of short introductions to EBI Services, run together, but bookable separately (see Related Courses section below).

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course provides a practical introduction to the Protein Data Bank in Europe(PDBe), which is maintained at the European Bioinformatics Institute (EBI), and the services it offers. Further information is available.

This session is one of a series of short introductions to EBI Services, run together, but bookable separately (see Related Courses section below).

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This session provides an introduction to the tools to access and analyze Metabolomics data available from the Europian Bioinformatics Institute (EBI). Further information for this session is available.

The session is one of a series of short introductions to EBI Services, run together, but bookable separately (see Related Courses section below).

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This session provides an introduction to the IntAct database system and analysis tools for molecular interaction data available from the European Bioinformatics Institute (EBI). Further information for this session is available.

This session is one of a series of short introductions to EBI Services, run together, but bookable separately (see Related Courses section below).

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.

This course sets out to introduce simple computing tools for molecular biologists. It is intended for users with a reasonable background in molecular biology but little or no experience of using the available computer resources. The course is based around an investigation into the disease aniridia. We have chosen a well researched human topic as it allows us best to demonstrate how information can be obtained both by analysis of raw sequence data and by interrogation of information resources where previously determined facts are organised and stored. Further information for this session is available.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.