All-provider course timetable
Thursday 19 July 2018
09:00 |
Advanced OpenMP
Finished
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09:30 |
Variant Discovery with GATK4
Finished
This workshop will focus on the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the “Best Practices” developed by the GATK team. You will learn why each step is essential to the variant discovery process, what are the operations performed on the data at each step, and how to use the GATK tools to get the most accurate and reliable results out of your dataset. In the course of this workshop, we highlight key functionalities such as the germline GVCF workflow for joint variant discovery in cohorts, somatic variant discovery using MuTect2, and copy number variation discovery using GATK-CNV. All analyses are demonstrated using GATK version 4. Finally, we demonstrate the use of pipelining tools to assemble and execute GATK workflows. The workshop covers basic genomics, all currently supported Best Practices pipelines as well as pipelining with WDL/Cromwell/FireCloud. This includes the logic of the major pipelines, file formats and data transformations involved, and hands-on operation of the tools using goal-oriented exercises.
Please note that this workshop is focused on human data analysis. The majority of the materials presented does apply equally to non-human data, and we will address some questions regarding adaptations that are needed for analysis of non-human data, but we will not go into much detail on those points. Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking here. |
This short session will provide an understanding of the principles, tools and techniques involved in Process Analysis with a view to improving business process effectiveness and efficiency. Delegates will have the opportunity to practice using the techniques that they learn via exercises designed to be enjoyable and thought provoking. The course refers to the methodology used in conjunction with Triaster process mapping software available to users across the University of Cambridge. |
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Apprenticeship Engagement Event
Finished
An information event about three apprenticeship cohorts being offered across the University: Leadership & Management Level 5, Project Management Level 4 and Data Analyst Level 4. There will be a presentation from the apprenticeship training provider selected to deliver these programmes - 3aaa. The event will involve short presentations lasting around 40 minutes. The remainder of the event will be a drop-in clinic for those people that have any queries and who would like to complete an expression of interest form. |
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These sessions are aimed at those who are brand new to HEAT (Higher Education Access Tracker) and who will want to be added to the live database as their institution’s Operational Lead or User. |
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12:00 |
Green Labs Cold Storage
Finished
Are you involved with cold storage in your lab? Come along to one of our workshops. We’ll examine the factors affecting your samples and the energy-hungry cold storage equipment that preserve them. Find out how we can all improve their performance and efficiency. |
13:00 |
Spanish: Beginner Intensive
Finished
Fun introductory course to Spanish. This course is for those with little or no previous knowledge of Spanish. Communicative context, with videos, audio, texts and conversation. |
13:30 |
To provide an opportunity for someone from elsewhere in Fin Ops to spend a day in the Central and Research Accounting Team to get an overview and appreciation of what they do including Fixed Assets, Fee Collection, Property Accounting, Trust Funds and Research Accounting. |
14:00 |
Developing Relaxation Skills
CANCELLED
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This course covers the various month-end processes that need to be completed within the iProcurement module. |
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Advanced OpenMP
Finished
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16:00 |
This course covers the various month-end processes that need to be completed within the iProcurement module. |
Friday 20 July 2018
09:30 |
Using the Ensembl Genome Browser
Finished
The Ensembl Project provides a comprehensive and integrated source of annotation of, mainly vertebrate, genome sequences. This workshop offers a comprehensive practical introduction to the use of the Ensembl genome browser as well as essential background information. This course will focus on the vertebrate genomes in Ensembl, however much of what will be covered is also applicable to the non-vertebrates (plants, bacteria, fungi, metazoa and protists) in Ensembl Genomes. Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking here. |
Pressurised Gas and Cryogens
Finished
This course will cover safe storage and use of cryogens, safe use and stores of compressed gas, and aspects of oxygen depletion with respect to the above. |
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10:00 |
How to help researchers navigate Open Access requirements (for librarians and administrators)
Finished
Are the researchers in your department confused about what they need to do about Open Access? This support session will equip you to help them understand:
Dr Arthur Smith of the Office of Scholarly Communication will discuss everything you need to know to guide researchers through the process of making research Open Access, and will demonstrate how to manage key tasks in Symplectic Elements. |
10:30 |
Amicus New User Interface
Finished
Learn about the new user interface for Amicus in this short presentation |
Monday 23 July 2018
09:00 |
A one day master class in communication from an external trainer who has previously been employed as a hostage negotiator and detective in the Metropolitan Police Force. Participants will gain a practical insight into how professional communicators communicate, and how it can be applied in everyday life. At the end of the session participants will:
Topics:
Please note that due to the popularity of this course any cancellations must be received by 10th July. Cancellation after this date, non-attendance or failure to attend for the full day will incur a cancellation fee of £50 and blocking from further attendance. Only book if you know you can come! |
09:30 |
Falls from ladders and other height access devices continue to cause injuries to people at work in the University. The new Work at Height Regulations (April 2005) have implications for the University because the emphasis has changed to any fall from any height. Anyone who uses ladders or who supervises work with ladders should attend this session. |
10:00 |
Amicus New User Interface
Finished
Learn about the new user interface for Amicus in this short presentation |
General induction for users of the Physics of Medicine (PoM) building. This includes a guided tour of the facility. Participants will gain access to PoM only after successfully completing the Physics H&S Induction - see "Related Courses" below. |
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14:00 |
This session is a working session to help you add and edit Biographical Details, add Addresses, and link Business Addresses in Amicus. |
Cambridge University Libraries Staff : SRDs - Getting the most out of your Staff Review Meeting
Finished
A briefing on the SRD process and how to get the most of it |
Tuesday 24 July 2018
09:30 |
This course covers the day to day and month end transactions that need to be completed using a variety of tools in CUFS. |
This course is for those who are new to the Recruitment Administration System (RAS) or those who wish to have a refresher. |
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10:00 |
Medicine: Research Data Management
Finished
There is an increasing emphasis in research on the management and sharing of data. Many funding bodies that support research undertaken at Cambridge require not only open access to any publications based on that research, but also to the data underlying it. This course will help you understand funders’ requirements for management and sharing of research data, and will provide opportunities to create your own data management plan and test out resources that will make the data management process easier. |
How to help researchers navigate Open Access requirements (for librarians and administrators)
Finished
Are the researchers in your department confused about what they need to do about Open Access? This support session will equip you to help them understand:
Dr Arthur Smith of the Office of Scholarly Communication will discuss everything you need to know to guide researchers through the process of making research Open Access, and will demonstrate how to manage key tasks in Symplectic Elements. |
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Amicus New User Interface
Finished
Learn about the new user interface for Amicus in this short presentation |
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12:00 |
Medicine: Writing for Publication
Finished
A course designed to take you step-by-step through academic writing and publication, with tips and resources to make writing up as simple as possible. The course will demystify the peer-review process, and help you to improve the precision and clarity of your academic writing. |
14:00 |
Learn about the new user interface for Amicus in this short presentation |