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Wed 11 Sep - Fri 13 Sep 2019
09:30 - 17:30

Venue: Bioinformatics Training Room, Craik-Marshall Building, Downing Site

Provided by: Bioinformatics


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1st ELIXIR-UK Hackathon
Special

Wed 11 Sep - Fri 13 Sep 2019

Description

ELIXIR-UK is organising its first Hackathon, which will bring together UK bioinformatics researchers to collaborate on increasing the interoperability of the various ELIXIR-UK resources, and other exciting projects.

ELIXIR-UK is the UK node of ELIXIR, an intergovernmental organisation that coordinates life science resources from across Europe so that they form a single infrastructure. These resources include databases, software tools, training materials, cloud storage and supercomputers.

During the Hackathon, we plan to work on the integration of various ELIXIR-supported resources, like Bioschemas, BridgeDb, CATH, CWL, FAIRDOM, FAIRsharing, Galaxy, InterMine, ISA tools, Jalview, PHI-base, Phyre2, Research Objects, SEEK and TeSS.

To propose a project for the Hackathon, please fill in this form.

The training room is located on the first floor and there is currently no wheelchair or level access available to this level.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking here.

Target audience

UK bioinformaticians, life science researchers, research software engineers and research data managers working with ELIXIR-supported tools and resources

Sessions

Number of sessions: 3

# Date Time Venue Trainer
1 Wed 11 Sep   09:30 - 17:30 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building, Downing Site map
2 Thu 12 Sep   09:30 - 17:30 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building, Downing Site map
3 Fri 13 Sep   09:30 - 17:30 09:30 - 17:30 Bioinformatics Training Room, Craik-Marshall Building, Downing Site map
Timetable

Day 1 Topics
9:30 - 10:00 Registration
10:00 - 10:30 Welcome and participants’ self-introduction
10:30 - 11:00 Coffee break
11:00 - 12:00 Introduction of proposed projects
12:00-13:00 Working in groups
13:00-14:00 Lunch
14:00-15:30 Working in groups
15:30 - 16:00 Coffee break
16:30 - 17:15 Working in groups
17:15-17:30 Progress reports
Day 2
9:30 - 10:30 Working in groups
10:30 - 11:00 Coffee break
11:00 - 13:00 Working in groups
13:00-14:00 Lunch
14:00-15:30 Working in groups
15:30 - 16:00 Coffee break
16:30 - 17:15 Working in groups
17:15-17:30 Progress reports
Day 3
9:30 - 10:30 Working in groups
10:30 - 11:00 Coffee break
11:00 - 13:00 Working in groups
13:00-14:00 Lunch
14:00-15:30 Working in groups
15:30 - 16:00 Final progress reports and closing remarks
Duration

3


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